| Package |
CloneSeeker |
| Version |
1.0.11 |
| Date |
2022-06-30 |
| Title |
Seeking and Finding Clones in Copy Number and Sequencing Data |
| Author |
Kevin R. Coombes, Mark Zucker |
| Maintainer |
Kevin R. Coombes <krc@silicovore.com> |
| Description |
Defines the classes and functions used to simulate and to analyze data sets describing copy number variants and, optionally, sequencing mutations in order to detect clonal subsets. See Zucker et al. (2019) <doi:10.1093/bioinformatics/btz057>. |
| Depends |
R (>= 3.0) |
| Imports |
methods, graphics, combinat, mc2d, quantmod |
| License |
Apache License (== 2.0) |
| URL |
http://oompa.r-forge.r-project.org/ |
| NeedsCompilation |
no |
| Packaged |
2022-07-20 18:11:06 UTC; KRC |
| Built |
R 4.2.1; ; 2022-07-20 18:11:27 UTC; windows |
| User Manual | CloneSeeker-manual.pdf |
| R CHECK | 00check.log |
| Vignettes |
CloneSeeker.pdf |
